Haplotype-frequency dynamics of seasonal influenza virus
Not art — haplotype-frequency dynamics of seasonal influenza virus

Takashi Okada

Associate Professor, Institute for Frontier Life and Medical Sciences, Kyoto University, Japan

I’m interested in biological physics: how simple, predictive laws emerge from messy microscopic interactions. I develop theory and inference tools for networked biochemical and evolutionary systems—linking connectivity to robustness and multistability in chemical reaction networks, characterizing non-classical drift in populations with extreme reproductive variability, and inferring transmission structure from viral allele-frequency time series. I also study information flow in stochastic control networks, aiming for analytic and interpretable descriptions of neural networks.

I received my Ph.D. in Physics from Kyoto University (2013), after completing my M.Sc. (2009) and B.Sc. (2007) in Physics at the University of Tokyo. I was at RIKEN from 2014 to 2022, then held faculty positions at Kyoto University (2022–2025), and I am currently an Associate Professor at Hiroshima University (as of 2026). I was also a Visiting Researcher at UC Berkeley (Hallatschek Lab, 2018–2022).

Research interests
  • Evolutionary dynamics and genetic drift
  • Theoretical biophysics of biochemical reaction systems
  • Information flow and control in complex systems

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Research overview
Short summaries of my main research directions and key results.
Publications
Peer-reviewed papers and preprints.
研究概要
Research overview in Japanese